STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SHF6_MUSAMAMP_N domain-containing protein. (163 aa)    
Predicted Functional Partners:
M0SHF7_MUSAM
Peptidase_M24 domain-containing protein.
 
     0.881
M0SCJ0_MUSAM
GCV_T domain-containing protein.
  
 0.628
M0SUJ7_MUSAM
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.628
M0T8H5_MUSAM
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.628
M0U9A8_MUSAM
DAO domain-containing protein.
  
 0.628
M0SQZ2_MUSAM
Peptidase_M3 domain-containing protein.
   
 
 0.601
M0TGT5_MUSAM
FAD-binding PCMH-type domain-containing protein.
    
  0.601
M0S0L1_MUSAM
Pyr_redox_2 domain-containing protein.
    
 0.591
M0S9M1_MUSAM
Pyr_redox_2 domain-containing protein.
    
 0.591
M0SZD0_MUSAM
Pyr_redox_2 domain-containing protein.
    
 0.591
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.