STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SLU6_MUSAMUncharacterized protein. (61 aa)    
Predicted Functional Partners:
M0SLG7_MUSAM
Uncharacterized protein.
  
 
 0.602
M0SKH4_MUSAM
Uncharacterized protein.
  
 
  0.601
M0U5E2_MUSAM
NAC domain-containing protein.
  
 
   0.565
M0TP67_MUSAM
Uncharacterized protein.
  
 
 0.562
M0U047_MUSAM
Uncharacterized protein.
  
 
   0.560
M0RPN7_MUSAM
Uncharacterized protein.
  
 
 0.551
M0RML6_MUSAM
Phytocyanin domain-containing protein.
  
   0.545
M0TXY2_MUSAM
Pectinesterase domain-containing protein.
  
 
  0.541
M0RQB0_MUSAM
NAC domain-containing protein.
  
 
   0.537
M0UCY7_MUSAM
Cupin type-1 domain-containing protein.
  
     0.535
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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