STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SN91_MUSAMUncharacterized protein. (273 aa)    
Predicted Functional Partners:
M0SVP2_MUSAM
Uncharacterized protein.
      
 0.681
M0S1Q5_MUSAM
LOB domain-containing protein.
  
     0.517
M0SV78_MUSAM
Uncharacterized protein.
  
     0.517
M0U375_MUSAM
Uncharacterized protein.
  
     0.515
M0UBI0_MUSAM
Uncharacterized protein.
  
     0.515
M0TFL3_MUSAM
Uncharacterized protein.
  
     0.513
M0SQS9_MUSAM
PH_2 domain-containing protein.
  
     0.510
M0RY69_MUSAM
Uncharacterized protein.
  
     0.508
M0TWH2_MUSAM
GRAM domain-containing protein.
  
     0.507
M0U2E1_MUSAM
Nsp1_C domain-containing protein.
  
     0.505
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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