STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SNW1_MUSAMUncharacterized protein. (240 aa)    
Predicted Functional Partners:
M0SH79_MUSAM
F-box domain-containing protein.
    
 
 0.485
M0T7I7_MUSAM
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
    
 
 0.455
M0SWU5_MUSAM
Uncharacterized protein.
      
 0.433
M0TDI6_MUSAM
Uncharacterized protein.
  
 
0.412
M0S7Q6_MUSAM
Uncharacterized protein.
  
 
0.407
M0T2V3_MUSAM
Uncharacterized protein.
  
 
0.405
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.