STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SQ38_MUSAMMethyltransferase. (622 aa)    
Predicted Functional Partners:
M0U3Z2_MUSAM
AAA domain-containing protein; Belongs to the AAA ATPase family.
      
 0.523
M0U5L0_MUSAM
Uncharacterized protein.
      
 0.523
M0UBB8_MUSAM
Uncharacterized protein.
  
     0.520
M0SRA3_MUSAM
Uncharacterized protein.
  
     0.518
M0UB96_MUSAM
Uncharacterized protein.
  
     0.516
M0RY31_MUSAM
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.513
M0SSY8_MUSAM
ALOG domain-containing protein.
  
     0.513
M0TA96_MUSAM
MACPF domain-containing protein.
  
     0.513
M0RTP8_MUSAM
ALOG domain-containing protein.
  
     0.512
M0RUK8_MUSAM
ALOG domain-containing protein.
  
     0.510
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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