STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SS38_MUSAMHMA domain-containing protein. (155 aa)    
Predicted Functional Partners:
M0SCE7_MUSAM
Uncharacterized protein.
      
 0.642
M0RW07_MUSAM
Uncharacterized protein.
  
     0.481
M0U9E2_MUSAM
Uncharacterized protein.
  
 
 
 0.475
M0SY29_MUSAM
Uncharacterized protein.
  
     0.474
M0TPW7_MUSAM
Uncharacterized protein.
  
     0.466
M0RI99_MUSAM
Uncharacterized protein.
  
     0.460
M0SWF1_MUSAM
NAB domain-containing protein.
  
   
 0.458
M0SWR8_MUSAM
NAB domain-containing protein.
  
   
 0.458
M0SXZ8_MUSAM
Uncharacterized protein.
  
     0.458
M0THS6_MUSAM
NAB domain-containing protein.
  
   
 0.458
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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