STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SSR7_MUSAMDUF3598 domain-containing protein. (420 aa)    
Predicted Functional Partners:
M0TAK7_MUSAM
Uncharacterized protein; Belongs to the endosulfine family.
  
     0.482
M0RPL3_MUSAM
zf-Di19 domain-containing protein.
  
     0.471
M0UC76_MUSAM
PEROXIDASE_4 domain-containing protein.
  
     0.471
M0TP93_MUSAM
zf-Di19 domain-containing protein.
  
     0.470
M0T491_MUSAM
Uncharacterized protein.
  
     0.466
M0RLX9_MUSAM
Uncharacterized protein.
  
     0.465
M0TEH1_MUSAM
zf-Di19 domain-containing protein.
  
     0.463
M0T0U9_MUSAM
Uncharacterized protein.
  
     0.451
M0TKY6_MUSAM
RING-type domain-containing protein.
  
     0.449
M0U8D8_MUSAM
Uncharacterized protein.
  
     0.443
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.