STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SV95_MUSAMUncharacterized protein. (134 aa)    
Predicted Functional Partners:
M0SL32_MUSAM
Uncharacterized protein.
   
 0.991
M0RYU6_MUSAM
RRM domain-containing protein.
   
 0.970
M0U0U8_MUSAM
Uncharacterized protein.
   
 0.970
M0TVT6_MUSAM
Uncharacterized protein.
   
 0.950
M0RQV2_MUSAM
Uncharacterized protein.
    
 0.913
M0TAX9_MUSAM
HAUS6_N domain-containing protein.
    
 0.913
M0TYC9_MUSAM
HAUS6_N domain-containing protein.
    
 0.913
M0RLM6_MUSAM
WD_REPEATS_REGION domain-containing protein.
   
 0.824
M0RG55_MUSAM
Uncharacterized protein.
     
 0.818
M0RZY3_MUSAM
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
     
 0.773
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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