M0SVZ3_MUSAM protein (Musa acuminata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M0SVZ3_MUSAM

Uncharacterized protein. (165 aa)

Predicted Functional Partners:

M0UC93_MUSAM

0.519

M0S0N3_MUSAM

0.504

M0TW25_MUSAM

0.496

M0UB02_MUSAM

0.495

M0TS17_MUSAM

0.492

M0SWF9_MUSAM

0.490

M0SZQ8_MUSAM

0.490

M0TKA5_MUSAM

0.490

M0T8Z8_MUSAM

0.489

M0TIJ6_MUSAM

0.488

Your Current Organism:

Musa acuminata

NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0S0N3_MUSAM	M0SVZ3_MUSAM	M0S0N3	M0SVZ3	Uncharacterized protein.	Uncharacterized protein.	0.504
M0S0N3_MUSAM	M0SWF9_MUSAM	M0S0N3	M0SWF9	Uncharacterized protein.	Uncharacterized protein.	0.507
M0S0N3_MUSAM	M0TIJ6_MUSAM	M0S0N3	M0TIJ6	Uncharacterized protein.	Uncharacterized protein.	0.477
M0S0N3_MUSAM	M0TS17_MUSAM	M0S0N3	M0TS17	Uncharacterized protein.	Uncharacterized protein.	0.502
M0S0N3_MUSAM	M0UB02_MUSAM	M0S0N3	M0UB02	Uncharacterized protein.	Uncharacterized protein.	0.468
M0S0N3_MUSAM	M0UC93_MUSAM	M0S0N3	M0UC93	Uncharacterized protein.	Uncharacterized protein; Belongs to the disease resistance NB-LRR family.	0.507
M0SVZ3_MUSAM	M0S0N3_MUSAM	M0SVZ3	M0S0N3	Uncharacterized protein.	Uncharacterized protein.	0.504
M0SVZ3_MUSAM	M0SWF9_MUSAM	M0SVZ3	M0SWF9	Uncharacterized protein.	Uncharacterized protein.	0.490
M0SVZ3_MUSAM	M0SZQ8_MUSAM	M0SVZ3	M0SZQ8	Uncharacterized protein.	Uncharacterized protein.	0.490
M0SVZ3_MUSAM	M0T8Z8_MUSAM	M0SVZ3	M0T8Z8	Uncharacterized protein.	Uncharacterized protein.	0.489
M0SVZ3_MUSAM	M0TIJ6_MUSAM	M0SVZ3	M0TIJ6	Uncharacterized protein.	Uncharacterized protein.	0.488
M0SVZ3_MUSAM	M0TKA5_MUSAM	M0SVZ3	M0TKA5	Uncharacterized protein.	Uncharacterized protein.	0.490
M0SVZ3_MUSAM	M0TS17_MUSAM	M0SVZ3	M0TS17	Uncharacterized protein.	Uncharacterized protein.	0.492
M0SVZ3_MUSAM	M0TW25_MUSAM	M0SVZ3	M0TW25	Uncharacterized protein.	Uncharacterized protein.	0.496
M0SVZ3_MUSAM	M0UB02_MUSAM	M0SVZ3	M0UB02	Uncharacterized protein.	Uncharacterized protein.	0.495
M0SVZ3_MUSAM	M0UC93_MUSAM	M0SVZ3	M0UC93	Uncharacterized protein.	Uncharacterized protein; Belongs to the disease resistance NB-LRR family.	0.519
M0SWF9_MUSAM	M0S0N3_MUSAM	M0SWF9	M0S0N3	Uncharacterized protein.	Uncharacterized protein.	0.507
M0SWF9_MUSAM	M0SVZ3_MUSAM	M0SWF9	M0SVZ3	Uncharacterized protein.	Uncharacterized protein.	0.490
M0SWF9_MUSAM	M0SZQ8_MUSAM	M0SWF9	M0SZQ8	Uncharacterized protein.	Uncharacterized protein.	0.447
M0SWF9_MUSAM	M0T8Z8_MUSAM	M0SWF9	M0T8Z8	Uncharacterized protein.	Uncharacterized protein.	0.497

page 1 of 4

Server load: low (22%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About