STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SXE7_MUSAMUncharacterized protein. (350 aa)    
Predicted Functional Partners:
M0TTN0_MUSAM
Uncharacterized protein.
  
   
 0.536
M0SGX6_MUSAM
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.476
M0T019_MUSAM
PMEI domain-containing protein.
  
     0.456
M0SHA4_MUSAM
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.455
M0SQW8_MUSAM
C1_2 domain-containing protein.
  
     0.452
M0RWX7_MUSAM
PMEI domain-containing protein.
  
     0.450
M0SSX1_MUSAM
AAI domain-containing protein.
  
     0.450
M0TLH7_MUSAM
Uncharacterized protein.
  
     0.439
M0SCB8_MUSAM
Uncharacterized protein.
  
     0.436
M0T8H0_MUSAM
Uncharacterized protein.
  
     0.436
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.