STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SXM0_MUSAMAa_trans domain-containing protein. (512 aa)    
Predicted Functional Partners:
M0TNG3_MUSAM
Protein kinase domain-containing protein.
    
 0.803
M0TJ68_MUSAM
TPR_REGION domain-containing protein.
      
 0.573
M0SC85_MUSAM
Uncharacterized protein.
   
  
 0.557
M0TD82_MUSAM
Uncharacterized protein.
   
  
 0.557
M0TT06_MUSAM
Uncharacterized protein.
   
  
 0.557
M0U3D0_MUSAM
Uncharacterized protein.
   
  
 0.557
M0U7T5_MUSAM
Uncharacterized protein.
   
  
 0.557
M0U7T7_MUSAM
Uncharacterized protein.
   
  
 0.557
M0SCJ5_MUSAM
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
  
  
 0.528
M0RIT6_MUSAM
Uncharacterized protein.
  
     0.517
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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