STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SYT8_MUSAMUncharacterized protein. (127 aa)    
Predicted Functional Partners:
M0SDC5_MUSAM
Uncharacterized protein.
    
 0.713
M0SUA6_MUSAM
Uncharacterized protein.
    
 0.713
M0TYQ2_MUSAM
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
     
 0.686
M0T3T7_MUSAM
Uncharacterized protein.
     
 0.664
M0SJF7_MUSAM
Uncharacterized protein.
     
 0.620
M0SJF8_MUSAM
RAB3GAP2_N domain-containing protein.
     
 0.620
M0TKL2_MUSAM
Uncharacterized protein.
     
 0.620
M0TKL3_MUSAM
Uncharacterized protein.
     
 0.620
M0RGC0_MUSAM
Uncharacterized protein.
    
 0.599
M0T1Y5_MUSAM
Uncharacterized protein.
    
 0.599
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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