STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0T0E2_MUSAMUncharacterized protein. (141 aa)    
Predicted Functional Partners:
M0TX90_MUSAM
Uncharacterized protein.
    
 0.828
M0U005_MUSAM
Uncharacterized protein.
    
 
 0.730
M0U006_MUSAM
Uncharacterized protein.
    
 
 0.730
M0RGN1_MUSAM
Uncharacterized protein.
   
 
 0.620
M0RMX1_MUSAM
Uncharacterized protein.
   
 
 0.590
M0T3C4_MUSAM
Uncharacterized protein.
   
 
 0.590
M0U052_MUSAM
Uncharacterized protein.
   
 
 0.590
M0TKC7_MUSAM
Uncharacterized protein.
     
 0.589
M0RER2_MUSAM
LIM zinc-binding domain-containing protein.
    
 0.559
M0S7W0_MUSAM
DUF1421 domain-containing protein.
    
 0.559
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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