STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0T0J6_MUSAMUncharacterized protein. (869 aa)    
Predicted Functional Partners:
M0U0N1_MUSAM
PALP domain-containing protein.
  
 
 0.666
M0U9I1_MUSAM
Amidohydro-rel domain-containing protein.
  
 
 0.666
M0T326_MUSAM
Pribosyltran domain-containing protein.
     
 0.644
M0T327_MUSAM
Pribosyltran domain-containing protein.
     
 0.644
M0SJQ2_MUSAM
CMP/dCMP-type deaminase domain-containing protein.
   
 0.632
M0TK90_MUSAM
Uncharacterized protein.
   
 0.632
M0U5U5_MUSAM
CMP/dCMP-type deaminase domain-containing protein.
   
 0.632
M0RH71_MUSAM
SnoaL-like domain-containing protein.
  
 
  0.576
M0TGZ7_MUSAM
Uncharacterized protein.
  
 
  0.576
M0RPA9_MUSAM
Pribosyltran domain-containing protein.
    
 0.486
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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