M0T2D4_MUSAM protein (Musa acuminata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M0T2D4_MUSAM

Protein kinase domain-containing protein. (574 aa)

Predicted Functional Partners:

M0TX90_MUSAM

0.673

M0S6S8_MUSAM

0.497

M0SAL1_MUSAM

0.452

M0SZG1_MUSAM

0.450

M0SS82_MUSAM

0.443

M0U9R6_MUSAM

0.441

M0SLL0_MUSAM

0.436

M0UBZ8_MUSAM

0.431

M0SS85_MUSAM

0.423

M0RJP7_MUSAM

0.420

Your Current Organism:

Musa acuminata

NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0RJP7_MUSAM	M0S6S8_MUSAM	M0RJP7	M0S6S8	Uncharacterized protein.	Uncharacterized protein.	0.462
M0RJP7_MUSAM	M0SZG1_MUSAM	M0RJP7	M0SZG1	Uncharacterized protein.	Uncharacterized protein.	0.470
M0RJP7_MUSAM	M0T2D4_MUSAM	M0RJP7	M0T2D4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.420
M0RJP7_MUSAM	M0TX90_MUSAM	M0RJP7	M0TX90	Uncharacterized protein.	Uncharacterized protein.	0.546
M0RJP7_MUSAM	M0U9R6_MUSAM	M0RJP7	M0U9R6	Uncharacterized protein.	Uncharacterized protein.	0.491
M0S6S8_MUSAM	M0RJP7_MUSAM	M0S6S8	M0RJP7	Uncharacterized protein.	Uncharacterized protein.	0.462
M0S6S8_MUSAM	M0T2D4_MUSAM	M0S6S8	M0T2D4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.497
M0S6S8_MUSAM	M0TX90_MUSAM	M0S6S8	M0TX90	Uncharacterized protein.	Uncharacterized protein.	0.546
M0SAL1_MUSAM	M0SZG1_MUSAM	M0SAL1	M0SZG1	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.526
M0SAL1_MUSAM	M0T2D4_MUSAM	M0SAL1	M0T2D4	LRRNT_2 domain-containing protein.	Protein kinase domain-containing protein.	0.452
M0SLL0_MUSAM	M0T2D4_MUSAM	M0SLL0	M0T2D4	LRRNT_2 domain-containing protein.	Protein kinase domain-containing protein.	0.436
M0SLL0_MUSAM	M0TX90_MUSAM	M0SLL0	M0TX90	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.546
M0SS82_MUSAM	M0T2D4_MUSAM	M0SS82	M0T2D4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.443
M0SS82_MUSAM	M0TX90_MUSAM	M0SS82	M0TX90	Uncharacterized protein.	Uncharacterized protein.	0.546
M0SS85_MUSAM	M0T2D4_MUSAM	M0SS85	M0T2D4	LRRNT_2 domain-containing protein.	Protein kinase domain-containing protein.	0.423
M0SS85_MUSAM	M0TX90_MUSAM	M0SS85	M0TX90	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.546
M0SZG1_MUSAM	M0RJP7_MUSAM	M0SZG1	M0RJP7	Uncharacterized protein.	Uncharacterized protein.	0.470
M0SZG1_MUSAM	M0SAL1_MUSAM	M0SZG1	M0SAL1	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.526
M0SZG1_MUSAM	M0T2D4_MUSAM	M0SZG1	M0T2D4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.450
M0SZG1_MUSAM	M0TX90_MUSAM	M0SZG1	M0TX90	Uncharacterized protein.	Uncharacterized protein.	0.511

page 1 of 3

Server load: low (28%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About