STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0T3T1_MUSAMUncharacterized protein. (226 aa)    
Predicted Functional Partners:
M0TE57_MUSAM
RRM_3 domain-containing protein.
   
 
 0.522
M0RF84_MUSAM
Uncharacterized protein.
  
     0.475
M0RZ00_MUSAM
THUMP domain-containing protein.
   
  
 0.433
M0SJT4_MUSAM
Uncharacterized protein.
   
  
 0.423
M0SLH3_MUSAM
CUE domain-containing protein.
  
     0.423
M0TS40_MUSAM
Uncharacterized protein.
   
  
 0.410
M0U4S6_MUSAM
ANK_REP_REGION domain-containing protein.
  
     0.409
M0TCY1_MUSAM
Uncharacterized protein.
  
     0.404
M0TYD6_MUSAM
Thymidylate_kin domain-containing protein.
      
 0.400
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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