STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0T5L2_MUSAMEpimerase domain-containing protein. (320 aa)    
Predicted Functional Partners:
M0T0P8_MUSAM
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.782
M0TGU8_MUSAM
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.782
M0U8F1_MUSAM
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.782
M0SFV1_MUSAM
Uncharacterized protein.
   
 0.758
M0T529_MUSAM
Uncharacterized protein.
   
 0.758
M0T9Q2_MUSAM
Uncharacterized protein.
   
 0.758
M0RVC8_MUSAM
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.733
M0SHB4_MUSAM
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.733
M0T226_MUSAM
Uncharacterized protein.
   
 0.733
M0RHS8_MUSAM
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.708
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.