STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0T6I7_MUSAMAa_trans domain-containing protein. (485 aa)    
Predicted Functional Partners:
M0RUE3_MUSAM
Uncharacterized protein.
  
     0.490
M0RUE8_MUSAM
Uncharacterized protein.
  
     0.477
M0T2L4_MUSAM
Aa_trans domain-containing protein.
  
     0.460
M0S4W4_MUSAM
Uncharacterized protein.
  
     0.435
M0U897_MUSAM
Uncharacterized protein.
  
 
   0.428
M0SF12_MUSAM
Uncharacterized protein.
  
 
   0.426
M0RUZ3_MUSAM
Uncharacterized protein.
  
     0.415
M0TCG4_MUSAM
Aa_trans domain-containing protein.
  
     0.414
M0SZW4_MUSAM
Uncharacterized protein.
  
     0.401
M0TLY2_MUSAM
Aa_trans domain-containing protein.
  
     0.401
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.