STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0T7D4_MUSAMRibosomal_L16 domain-containing protein. (149 aa)    
Predicted Functional Partners:
M0RLP8_MUSAM
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.978
M0REW1_MUSAM
Uncharacterized protein.
   
 
 0.975
M0RU71_MUSAM
Ribosomal_L6 domain-containing protein.
  
 0.974
M0S089_MUSAM
Uncharacterized protein.
   
 0.974
M0S3X9_MUSAM
Ribosomal_L6 domain-containing protein.
  
 0.974
M0SEA6_MUSAM
Uncharacterized protein.
   
 0.974
M0T068_MUSAM
Ribosomal_L6 domain-containing protein.
  
 0.974
M0TIW8_MUSAM
Uncharacterized protein.
   
 0.974
M0TEI9_MUSAM
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 0.972
M0SRD3_MUSAM
Uncharacterized protein.
   
 
 0.968
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.