STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0T8J4_MUSAM3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (967 aa)    
Predicted Functional Partners:
M0TYJ9_MUSAM
Uncharacterized protein.
   
 
 0.950
M0RWG8_MUSAM
HECT domain-containing protein.
   
  
 0.881
M0RWG9_MUSAM
HECT domain-containing protein.
   
  
 0.881
M0SYE5_MUSAM
HECT domain-containing protein.
   
  
 0.881
M0TQ04_MUSAM
Uncharacterized protein.
   
  
 0.881
M0TQ05_MUSAM
HECT domain-containing protein.
   
  
 0.881
M0U7R0_MUSAM
Uncharacterized protein.
    
 
 0.854
M0U7R1_MUSAM
Uncharacterized protein.
    
 
 0.854
M0RWN5_MUSAM
Uncharacterized protein.
   
 
 0.843
M0SRX8_MUSAM
Uncharacterized protein.
   
 
 0.843
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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