STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0T989_MUSAMFmp27_GFWDK domain-containing protein. (2007 aa)    
Predicted Functional Partners:
M0TFC0_MUSAM
MRP-S28 domain-containing protein.
   
 0.758
M0RNK5_MUSAM
Tr-type G domain-containing protein.
   
 0.734
M0SH43_MUSAM
Tr-type G domain-containing protein.
   
 0.734
M0TNC4_MUSAM
Tr-type G domain-containing protein.
   
 0.734
M0S8V6_MUSAM
Uncharacterized protein.
    
 0.706
M0T988_MUSAM
Apt1 domain-containing protein.
 
     0.692
M0REW1_MUSAM
Uncharacterized protein.
    
  0.647
M0U5X0_MUSAM
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
    
  0.637
M0SEQ7_MUSAM
BEACH-type PH domain-containing protein.
  
    0.622
M0SHQ6_MUSAM
Uncharacterized protein.
  
    0.611
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.