STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0TCL8_MUSAMRRM domain-containing protein. (110 aa)    
Predicted Functional Partners:
M0T7Y0_MUSAM
RRM domain-containing protein.
  
 
 0.622
M0RGV1_MUSAM
RRM domain-containing protein.
  
 
 0.605
M0U0F7_MUSAM
Uncharacterized protein.
  
   0.598
M0THN6_MUSAM
RRM domain-containing protein.
  
 0.570
M0SGP4_MUSAM
Uncharacterized protein.
   
 
 0.567
M0RPZ4_MUSAM
Uncharacterized protein.
  
   
 0.562
M0RKG6_MUSAM
Uncharacterized protein.
  
 
 
 0.560
M0RG71_MUSAM
Uncharacterized protein.
  
 
  0.544
M0RVA1_MUSAM
Uncharacterized protein.
  
     0.541
M0SZF1_MUSAM
Uncharacterized protein.
  
     0.539
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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