STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0TEW6_MUSAMChorismate mutase. (259 aa)    
Predicted Functional Partners:
CS1
Chorismate synthase.
  
 
 0.989
M0RUL9_MUSAM
Chorismate synthase.
  
 
 0.989
M0TYC8_MUSAM
Uncharacterized protein.
  
 
 0.959
M0T1T0_MUSAM
Aminotran_1_2 domain-containing protein.
    
 0.944
M0T4J5_MUSAM
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.944
ICS
Chorismate_bind domain-containing protein.
  
 
 0.941
M0TRN7_MUSAM
Uncharacterized protein.
  
 
 0.894
M0SG63_MUSAM
Uncharacterized protein.
  
 
 0.884
M0TIH9_MUSAM
Uncharacterized protein.
  
 
 0.884
M0U411_MUSAM
Uncharacterized protein.
  
 
 0.884
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.