STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0THG2_MUSAMUncharacterized protein. (493 aa)    
Predicted Functional Partners:
M0RRS4_MUSAM
Spt4 domain-containing protein.
    
 0.951
M0S0U7_MUSAM
RPOL4c domain-containing protein.
    
 0.950
M0S9F4_MUSAM
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 0.944
M0U2U0_MUSAM
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
 0.939
M0TT97_MUSAM
RPOL4c domain-containing protein.
    
 0.908
M0SFN6_MUSAM
Uncharacterized protein.
    
 0.899
M0SSI1_MUSAM
Uncharacterized protein.
    
 0.899
M0T9R8_MUSAM
Uncharacterized protein.
    
 0.889
M0TA84_MUSAM
Uncharacterized protein.
    
 0.889
M0TIH2_MUSAM
TYR_PHOSPHATASE_2 domain-containing protein.
    
 0.887
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.