STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0THP6_MUSAMUncharacterized protein. (693 aa)    
Predicted Functional Partners:
M0TX90_MUSAM
Uncharacterized protein.
   
 0.915
M0RZU7_MUSAM
Uncharacterized protein.
  
 
  0.508
M0SR35_MUSAM
Uncharacterized protein.
  
 
  0.508
M0SX41_MUSAM
Jacalin-type lectin domain-containing protein.
  
 
  0.489
M0TL84_MUSAM
Uncharacterized protein.
  
     0.489
M0TIX9_MUSAM
Uncharacterized protein.
  
 
  0.486
M0RI77_MUSAM
Zinc_ribbon_12 domain-containing protein.
  
 
  0.482
M0RM71_MUSAM
ENT domain-containing protein.
  
     0.480
M0T6D6_MUSAM
Uncharacterized protein.
  
 
   0.480
M0RVB8_MUSAM
Uncharacterized protein.
  
     0.479
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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