M0TI20_MUSAM protein (Musa acuminata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M0TI20_MUSAM

Uncharacterized protein. (50 aa)

Predicted Functional Partners:

M0T0M1_MUSAM

0.981

M0TYK2_MUSAM

0.978

M0S0Z6_MUSAM

0.976

M0SV19_MUSAM

0.966

M0TTD5_MUSAM

0.947

M0RKE6_MUSAM

0.934

M0TB91_MUSAM

0.932

M0U0U5_MUSAM

0.879

M0U2X2_MUSAM

0.857

M0TTI3_MUSAM

0.788

Your Current Organism:

Musa acuminata

NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0RKE6_MUSAM	M0S0Z6_MUSAM	M0RKE6	M0S0Z6	MTS domain-containing protein.	MTS domain-containing protein.	0.667
M0RKE6_MUSAM	M0SV19_MUSAM	M0RKE6	M0SV19	MTS domain-containing protein.	MTS domain-containing protein.	0.562
M0RKE6_MUSAM	M0T0M1_MUSAM	M0RKE6	M0T0M1	MTS domain-containing protein.	Uncharacterized protein.	0.657
M0RKE6_MUSAM	M0TB91_MUSAM	M0RKE6	M0TB91	MTS domain-containing protein.	SAM_MT_TRM5_TYW2 domain-containing protein.	0.578
M0RKE6_MUSAM	M0TI20_MUSAM	M0RKE6	M0TI20	MTS domain-containing protein.	Uncharacterized protein.	0.934
M0S0Z6_MUSAM	M0RKE6_MUSAM	M0S0Z6	M0RKE6	MTS domain-containing protein.	MTS domain-containing protein.	0.667
M0S0Z6_MUSAM	M0SV19_MUSAM	M0S0Z6	M0SV19	MTS domain-containing protein.	MTS domain-containing protein.	0.656
M0S0Z6_MUSAM	M0T0M1_MUSAM	M0S0Z6	M0T0M1	MTS domain-containing protein.	Uncharacterized protein.	0.656
M0S0Z6_MUSAM	M0TI20_MUSAM	M0S0Z6	M0TI20	MTS domain-containing protein.	Uncharacterized protein.	0.976
M0S0Z6_MUSAM	M0TTD5_MUSAM	M0S0Z6	M0TTD5	MTS domain-containing protein.	Methyltransf_11 domain-containing protein.	0.531
M0S0Z6_MUSAM	M0TYK2_MUSAM	M0S0Z6	M0TYK2	MTS domain-containing protein.	UPF0020 domain-containing protein.	0.658
M0SV19_MUSAM	M0RKE6_MUSAM	M0SV19	M0RKE6	MTS domain-containing protein.	MTS domain-containing protein.	0.562
M0SV19_MUSAM	M0S0Z6_MUSAM	M0SV19	M0S0Z6	MTS domain-containing protein.	MTS domain-containing protein.	0.656
M0SV19_MUSAM	M0TB91_MUSAM	M0SV19	M0TB91	MTS domain-containing protein.	SAM_MT_TRM5_TYW2 domain-containing protein.	0.642
M0SV19_MUSAM	M0TI20_MUSAM	M0SV19	M0TI20	MTS domain-containing protein.	Uncharacterized protein.	0.966
M0SV19_MUSAM	M0TYK2_MUSAM	M0SV19	M0TYK2	MTS domain-containing protein.	UPF0020 domain-containing protein.	0.607
M0T0M1_MUSAM	M0RKE6_MUSAM	M0T0M1	M0RKE6	Uncharacterized protein.	MTS domain-containing protein.	0.657
M0T0M1_MUSAM	M0S0Z6_MUSAM	M0T0M1	M0S0Z6	Uncharacterized protein.	MTS domain-containing protein.	0.656
M0T0M1_MUSAM	M0TB91_MUSAM	M0T0M1	M0TB91	Uncharacterized protein.	SAM_MT_TRM5_TYW2 domain-containing protein.	0.707
M0T0M1_MUSAM	M0TI20_MUSAM	M0T0M1	M0TI20	Uncharacterized protein.	Uncharacterized protein.	0.981

page 1 of 4

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About