STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0TP92_MUSAMUncharacterized protein. (250 aa)    
Predicted Functional Partners:
M0SWV5_MUSAM
Uncharacterized protein.
    
 0.836
M0RQV8_MUSAM
Uncharacterized protein.
   
 0.764
M0U0U0_MUSAM
Uncharacterized protein.
   
 0.682
M0RS05_MUSAM
Uncharacterized protein.
    
 0.637
M0S4I6_MUSAM
Uncharacterized protein.
    
 0.637
M0S9P9_MUSAM
Helicase ATP-binding domain-containing protein.
    
 0.601
M0S9Q0_MUSAM
Helicase C-terminal domain-containing protein.
    
 0.601
M0SC09_MUSAM
Uncharacterized protein.
    
 0.556
M0SC10_MUSAM
ERCC4 domain-containing protein.
    
 0.556
M0SS96_MUSAM
PPIase cyclophilin-type domain-containing protein.
    
 0.556
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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