STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0TQ09_MUSAMUncharacterized protein; Belongs to the SKP1 family. (168 aa)    
Predicted Functional Partners:
M0UAB7_MUSAM
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.929
M0U7W6_MUSAM
Ribosomal_L2_C domain-containing protein.
   
 0.859
M0RJW6_MUSAM
RING-type domain-containing protein.
   
 0.851
M0T5G4_MUSAM
RING-type domain-containing protein.
   
 0.851
M0RFP1_MUSAM
MPN domain-containing protein.
   
 0.841
M0SAT6_MUSAM
RING-type domain-containing protein.
   
 0.811
M0T4X2_MUSAM
F-box domain-containing protein.
    
 0.803
M0T7Z2_MUSAM
Uncharacterized protein.
    
 0.803
M0T7Z3_MUSAM
F-box domain-containing protein.
    
 0.803
M0SPN0_MUSAM
RING-type domain-containing protein.
   
 0.795
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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