STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0TRZ9_MUSAMLipase_GDSL domain-containing protein. (354 aa)    
Predicted Functional Partners:
M0U7W6_MUSAM
Ribosomal_L2_C domain-containing protein.
   
 
 0.481
M0RK56_MUSAM
Uncharacterized protein.
    
 0.479
M0RNA5_MUSAM
Ribosomal_L2_C domain-containing protein.
   
 
 0.434
M0RUJ1_MUSAM
Ribosomal_L2_C domain-containing protein.
   
 
 0.434
M0SZQ3_MUSAM
Ribosomal_L2_C domain-containing protein.
   
 
 0.434
M0RW12_MUSAM
Uncharacterized protein.
   
   0.432
M0S6Q4_MUSAM
Uncharacterized protein.
   
   0.432
M0SSC4_MUSAM
Uncharacterized protein.
   
   0.432
M0STD4_MUSAM
Uncharacterized protein.
   
   0.432
M0SY31_MUSAM
Uncharacterized protein.
   
   0.432
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.