STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0TU06_MUSAMUncharacterized protein. (149 aa)    
Predicted Functional Partners:
M0SVG1_MUSAM
Uncharacterized protein.
     
 0.795
M0TGF5_MUSAM
TFIID_20kDa domain-containing protein.
   
  0.713
M0S752_MUSAM
Uncharacterized protein.
     
 0.653
M0SKQ5_MUSAM
Uncharacterized protein.
   
  0.644
M0SNT6_MUSAM
Uncharacterized protein.
   
  0.644
M0U9N6_MUSAM
Uncharacterized protein.
   
 0.643
M0TXX5_MUSAM
TAFII28 domain-containing protein.
    
  0.628
M0RH04_MUSAM
TFIID_20kDa domain-containing protein.
   
  0.623
M0S3E1_MUSAM
ING domain-containing protein.
  
  
  0.614
M0U2U0_MUSAM
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 
  0.614
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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