STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0TWY8_MUSAMUncharacterized protein. (749 aa)    
Predicted Functional Partners:
M0SVJ8_MUSAM
Uncharacterized protein.
  
     0.474
M0SYC1_MUSAM
AT-hook motif nuclear-localized protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).
  
     0.470
M0TDB4_MUSAM
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.468
M0RNU6_MUSAM
PMEI domain-containing protein.
  
     0.467
M0T0P7_MUSAM
Uncharacterized protein.
  
     0.467
M0TD79_MUSAM
Uncharacterized protein.
  
     0.467
M0S400_MUSAM
Phytocyanin domain-containing protein.
  
     0.466
M0T9P8_MUSAM
Uncharacterized protein.
  
     0.465
M0U450_MUSAM
LEA_2 domain-containing protein.
  
     0.462
M0T026_MUSAM
Phytocyanin domain-containing protein.
  
     0.458
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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