M0U1E5_MUSAM protein (Musa acuminata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M0U1E5_MUSAM

Uncharacterized protein. (232 aa)

Predicted Functional Partners:

M0T767_MUSAM

0.472

M0RHZ9_MUSAM

0.470

M0TPM0_MUSAM

0.464

M0SG93_MUSAM

0.446

M0TM37_MUSAM

0.442

M0RMM5_MUSAM

0.436

M0RVZ4_MUSAM

0.430

M0RGF6_MUSAM

0.429

M0SQQ1_MUSAM

0.420

M0TGK8_MUSAM

0.416

Your Current Organism:

Musa acuminata

NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0RGF6_MUSAM	M0RHZ9_MUSAM	M0RGF6	M0RHZ9	MlaD domain-containing protein.	Bac_surface_Ag domain-containing protein.	0.414
M0RGF6_MUSAM	M0RMM5_MUSAM	M0RGF6	M0RMM5	MlaD domain-containing protein.	CAAD domain-containing protein.	0.440
M0RGF6_MUSAM	M0SG93_MUSAM	M0RGF6	M0SG93	MlaD domain-containing protein.	CAAD domain-containing protein.	0.438
M0RGF6_MUSAM	M0U1E5_MUSAM	M0RGF6	M0U1E5	MlaD domain-containing protein.	Uncharacterized protein.	0.429
M0RHZ9_MUSAM	M0RGF6_MUSAM	M0RHZ9	M0RGF6	Bac_surface_Ag domain-containing protein.	MlaD domain-containing protein.	0.414
M0RHZ9_MUSAM	M0TM37_MUSAM	M0RHZ9	M0TM37	Bac_surface_Ag domain-containing protein.	MlaD domain-containing protein.	0.407
M0RHZ9_MUSAM	M0U1E5_MUSAM	M0RHZ9	M0U1E5	Bac_surface_Ag domain-containing protein.	Uncharacterized protein.	0.470
M0RMM5_MUSAM	M0RGF6_MUSAM	M0RMM5	M0RGF6	CAAD domain-containing protein.	MlaD domain-containing protein.	0.440
M0RMM5_MUSAM	M0TM37_MUSAM	M0RMM5	M0TM37	CAAD domain-containing protein.	MlaD domain-containing protein.	0.456
M0RMM5_MUSAM	M0U1E5_MUSAM	M0RMM5	M0U1E5	CAAD domain-containing protein.	Uncharacterized protein.	0.436
M0RVZ4_MUSAM	M0U1E5_MUSAM	M0RVZ4	M0U1E5	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.430
M0SG93_MUSAM	M0RGF6_MUSAM	M0SG93	M0RGF6	CAAD domain-containing protein.	MlaD domain-containing protein.	0.438
M0SG93_MUSAM	M0TM37_MUSAM	M0SG93	M0TM37	CAAD domain-containing protein.	MlaD domain-containing protein.	0.451
M0SG93_MUSAM	M0U1E5_MUSAM	M0SG93	M0U1E5	CAAD domain-containing protein.	Uncharacterized protein.	0.446
M0SQQ1_MUSAM	M0U1E5_MUSAM	M0SQQ1	M0U1E5	Uncharacterized protein.	Uncharacterized protein.	0.420
M0T767_MUSAM	M0U1E5_MUSAM	M0T767	M0U1E5	Bac_surface_Ag domain-containing protein.	Uncharacterized protein.	0.472
M0TGK8_MUSAM	M0U1E5_MUSAM	M0TGK8	M0U1E5	PAS domain-containing protein.	Uncharacterized protein.	0.416
M0TM37_MUSAM	M0RHZ9_MUSAM	M0TM37	M0RHZ9	MlaD domain-containing protein.	Bac_surface_Ag domain-containing protein.	0.407
M0TM37_MUSAM	M0RMM5_MUSAM	M0TM37	M0RMM5	MlaD domain-containing protein.	CAAD domain-containing protein.	0.456
M0TM37_MUSAM	M0SG93_MUSAM	M0TM37	M0SG93	MlaD domain-containing protein.	CAAD domain-containing protein.	0.451

page 1 of 2

Server load: low (20%) [HD]

Permalink

Network

Cooccurrence

Textmining

Coexpression

Experiments

Neighborhood

Databases

Fusion

© STRING Consortium 2023

Credits

Access

Info

About