STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0U255_MUSAMMINDY_DUB domain-containing protein. (503 aa)    
Predicted Functional Partners:
M0RTB3_MUSAM
Ubiquitin-like domain-containing protein.
   
   0.702
M0RTB4_MUSAM
Ubiquitin-like domain-containing protein.
   
   0.702
M0RVK1_MUSAM
Ubiquitin-like domain-containing protein.
   
   0.702
M0S2V6_MUSAM
Ubiquitin-like domain-containing protein.
    
   0.702
M0TSM9_MUSAM
Ubiquitin-like domain-containing protein.
    
   0.702
M0TVP4_MUSAM
Ubiquitin-like domain-containing protein.
   
   0.702
M0U4S3_MUSAM
Ubiquitin-like domain-containing protein.
   
   0.702
M0U515_MUSAM
Ubiquitin-like domain-containing protein.
    
   0.702
M0RFM1_MUSAM
SET domain-containing protein.
    
 0.668
M0RUF8_MUSAM
SET domain-containing protein.
    
 0.668
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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