STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0U308_MUSAMUncharacterized protein. (196 aa)    
Predicted Functional Partners:
M0SG92_MUSAM
Prohibitin.
   
 0.729
M0TIQ4_MUSAM
Prohibitin.
   
 0.729
M0U7W6_MUSAM
Ribosomal_L2_C domain-containing protein.
   
 
 0.716
M0RLP8_MUSAM
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.687
M0U6U1_MUSAM
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
   0.648
M0REW1_MUSAM
Uncharacterized protein.
  
 
 0.641
M0U5X0_MUSAM
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.615
M0U7L5_MUSAM
Uncharacterized protein.
   
   0.609
M0RSC6_MUSAM
Prohibitin.
   
 0.599
M0SGR0_MUSAM
Prohibitin.
   
 0.599
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.