STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0U3D6_MUSAMUncharacterized protein. (307 aa)    
Predicted Functional Partners:
M0T2E4_MUSAM
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.634
M0TXF5_MUSAM
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.634
M0U0J7_MUSAM
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.634
M0TBM7_MUSAM
Glutamine amidotransferase type-2 domain-containing protein.
     
 0.615
M0T5E9_MUSAM
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
     
 0.569
M0SHX0_MUSAM
PALP domain-containing protein.
   
  
 0.505
M0S8N9_MUSAM
DUF1767 domain-containing protein.
      
 0.403
M0TB87_MUSAM
Uncharacterized protein.
      
 0.400
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.