STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0U4W5_MUSAMCRAL-TRIO domain-containing protein. (544 aa)    
Predicted Functional Partners:
M0T2N7_MUSAM
CRAL-TRIO domain-containing protein.
      
 0.620
M0SEL5_MUSAM
CRAL-TRIO domain-containing protein.
      
 0.610
M0S427_MUSAM
CRAL-TRIO domain-containing protein.
      
 0.526
M0TRP7_MUSAM
Uncharacterized protein.
      
 0.478
M0RQ82_MUSAM
Uncharacterized protein.
      
 0.455
M0TUI4_MUSAM
Malate synthase; Belongs to the malate synthase family.
   
  
 0.449
M0RWD3_MUSAM
CRAL-TRIO domain-containing protein.
      
 0.412
M0SXN6_MUSAM
CRAL-TRIO domain-containing protein.
      
 0.412
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.