STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0U5K1_MUSAMDilute domain-containing protein. (198 aa)    
Predicted Functional Partners:
M0U5C5_MUSAM
Mitochondrial Rho GTPase.
    
 0.474
M0U5C6_MUSAM
Miro domain-containing protein.
    
 0.474
M0U5C7_MUSAM
Uncharacterized protein.
    
 0.474
M0SE86_MUSAM
AP2/ERF domain-containing protein.
  
  0.473
M0TEY1_MUSAM
AP2/ERF domain-containing protein.
  
  0.469
M0T0P4_MUSAM
AP2/ERF domain-containing protein.
  
  0.450
M0UCQ2_MUSAM
AP2/ERF domain-containing protein.
  
  0.435
M0SH29_MUSAM
Sec8_exocyst domain-containing protein.
    
 0.434
M0SH30_MUSAM
Uncharacterized protein.
    
 0.434
M0TR39_MUSAM
Uncharacterized protein; Belongs to the actin family.
    
 0.427
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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