STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0U5Q7_MUSAMUncharacterized protein. (61 aa)    
Predicted Functional Partners:
M0RJI5_MUSAM
Uncharacterized protein.
   
 
 0.751
M0U1T4_MUSAM
Uncharacterized protein.
  
   0.726
M0RY66_MUSAM
Uncharacterized protein.
   
 
 0.696
M0STY2_MUSAM
Uncharacterized protein.
  
   
 0.684
M0RLP8_MUSAM
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.657
M0SAU0_MUSAM
Uncharacterized protein.
   
 
 0.653
M0U7W6_MUSAM
Ribosomal_L2_C domain-containing protein.
   
   0.650
M0SDK2_MUSAM
Uncharacterized protein.
   
   0.641
M0TFC0_MUSAM
MRP-S28 domain-containing protein.
   
   0.635
M0TUE3_MUSAM
BHLH domain-containing protein.
  
   
 0.623
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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