STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0U668_MUSAMNAC domain-containing protein. (759 aa)    
Predicted Functional Partners:
M0RH52_MUSAM
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.958
M0SXY4_MUSAM
Uncharacterized protein.
    
 0.873
M0S386_MUSAM
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.861
M0RG22_MUSAM
Uncharacterized protein.
   
 0.836
M0SBX8_MUSAM
Uncharacterized protein.
   
 0.836
M0UBF8_MUSAM
RPA_C domain-containing protein.
   
 0.836
M0RMU1_MUSAM
DNA helicase; Belongs to the MCM family.
   
 0.796
M0S8N9_MUSAM
DUF1767 domain-containing protein.
    
 0.777
M0T0I5_MUSAM
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.
   
   0.747
M0SEH1_MUSAM
CCHC-type domain-containing protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.737
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.