STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0UBI4_MUSAMSin3a_C domain-containing protein. (334 aa)    
Predicted Functional Partners:
M0SNG1_MUSAM
MRG domain-containing protein.
    
 0.864
M0SUT5_MUSAM
Uncharacterized protein.
   
 
 0.808
M0TT42_MUSAM
Uncharacterized protein.
   
 
 0.808
M0RZV2_MUSAM
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.763
M0S5P3_MUSAM
Hist_deacetyl domain-containing protein.
   
 0.763
M0S9F0_MUSAM
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.763
M0SW61_MUSAM
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.763
M0T7S4_MUSAM
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.763
M0TMH2_MUSAM
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.763
M0U5K5_MUSAM
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.763
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.