STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0UCG2_MUSAMAN1-type domain-containing protein. (99 aa)    
Predicted Functional Partners:
M0S2V6_MUSAM
Ubiquitin-like domain-containing protein.
    
  0.482
M0TSM9_MUSAM
Ubiquitin-like domain-containing protein.
    
  0.482
M0U515_MUSAM
Ubiquitin-like domain-containing protein.
    
  0.482
M0T8K1_MUSAM
Uncharacterized protein.
     
 0.429
M0RVK1_MUSAM
Ubiquitin-like domain-containing protein.
    
 0.428
M0TVP4_MUSAM
Ubiquitin-like domain-containing protein.
    
 0.428
M0TJ68_MUSAM
TPR_REGION domain-containing protein.
    
  0.400
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.