STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0UCS1_MUSAMUncharacterized protein. (149 aa)    
Predicted Functional Partners:
M0TX90_MUSAM
Uncharacterized protein.
   
 0.673
M0SQL7_MUSAM
Uncharacterized protein.
  
  
  0.540
M0SX77_MUSAM
Uncharacterized protein.
  
  
  0.533
M0RNP1_MUSAM
LOB domain-containing protein.
  
 
  0.530
M0S804_MUSAM
Uncharacterized protein.
  
  
  0.530
M0T3S8_MUSAM
Uncharacterized protein.
  
  
  0.525
M0S1S1_MUSAM
Uncharacterized protein.
  
  
  0.522
M0RW44_MUSAM
LOB domain-containing protein.
  
 
  0.511
M0SI07_MUSAM
Uncharacterized protein.
  
  
  0.511
M0T1H1_MUSAM
BHLH domain-containing protein.
  
     0.511
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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