STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0UDD4_MUSAMUncharacterized protein. (202 aa)    
Predicted Functional Partners:
M0RF16_MUSAM
Uncharacterized protein.
  
     0.544
M0S3U8_MUSAM
Uncharacterized protein.
  
     0.544
M0RFL0_MUSAM
Uncharacterized protein.
 
     0.522
M0S3V6_MUSAM
Uncharacterized protein.
  
     0.518
M0U168_MUSAM
J domain-containing protein.
  
     0.493
M0TJF4_MUSAM
Uncharacterized protein.
  
     0.488
M0SZJ8_MUSAM
Uncharacterized protein.
  
     0.476
M0RUP9_MUSAM
Uncharacterized protein.
  
     0.475
M0SCE2_MUSAM
Uncharacterized protein.
  
    0.474
M0RZX2_MUSAM
ELYS domain-containing protein.
  
     0.459
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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