STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN40241.1Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (595 aa)    
Predicted Functional Partners:
SEN15606.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.992
SEN40266.1
Indolepyruvate ferredoxin oxidoreductase beta subunit.
 
 0.987
SEN45331.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.852
SEN33119.1
NADPH-dependent glutamate synthase beta chain.
 
 
 0.847
SEN90111.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
    
 0.822
SEN94785.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.813
SEN40296.1
Phosphate butyryltransferase.
       0.513
SEN90090.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreT.
 
 
  0.455
buk
Butyrate kinase; Belongs to the acetokinase family.
       0.409
Your Current Organism:
Peptostreptococcus russellii
NCBI taxonomy Id: 215200
Other names: CCUG 58235, DSM 23041, NRRL B-59380, P. russellii, Peptostreptococcus russellii Whitehead et al. 2011, strain RT-10B, swine manure bacterium 37-1, swine manure bacterium RT-10B, swine manure bacterium RT-13B, swine manure bacterium RT-18B, swine manure bacterium RT-19A, swine manure bacterium RT-23A, swine manure bacterium RT-8A
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