STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_11219RING-type domain-containing protein. (217 aa)    
Predicted Functional Partners:
PV06_09753
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.765
PV06_08631
DNA repair protein rad18.
    
 0.734
PV06_08318
RING-type domain-containing protein.
    
0.734
PV06_06671
Vezatin domain-containing protein.
   
 0.730
PV06_06679
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.730
PV06_03438
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.726
PV06_05137
Uncharacterized protein; Belongs to the actin family.
    
 0.721
PV06_00773
Uncharacterized protein.
    
 0.715
PV06_04278
Ubiquitin-40S ribosomal protein S27a.
    
  0.683
PV06_02579
BZIP domain-containing protein.
    
  0.683
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.