STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_10096RWD domain-containing protein. (232 aa)    
Predicted Functional Partners:
PV06_09611
OBG-type G domain-containing protein.
   
 
 0.927
PV06_03656
Ribosome-interacting GTPase 1.
   
 
 0.872
PV06_00420
Translation machinery-associated protein 22.
   
    0.754
PV06_00116
Uncharacterized protein.
    
 
 0.727
PV06_05072
Uncharacterized protein.
   
 
 0.691
PV06_03924
Uncharacterized protein.
   
 
 0.644
PV06_10872
MAP kinase kinase kinase.
    
   0.624
PV06_06460
Uncharacterized protein.
   
 
 0.584
PV06_05573
Uncharacterized protein.
   
 
 0.584
PV06_08642
NUC153 domain-containing protein.
   
   0.540
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.