STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_09646Uncharacterized protein. (675 aa)    
Predicted Functional Partners:
PV06_06577
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.722
PV06_04066
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.631
PV06_02955
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.622
PV06_09883
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
    
   0.622
PV06_04537
Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis.
   
  0.608
PV06_09656
TIGR01456 family HAD hydrolase.
   
  0.605
PV06_06666
TIGR01456 family HAD hydrolase.
   
  0.605
PV06_03227
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
  0.605
PV06_06730
Uncharacterized protein.
    
 0.593
PV06_11370
Uncharacterized protein.
    
 0.556
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.