Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV06_00604 | PV06_01009 | A0A0D2CDP4 | A0A0D2EKJ7 | D-xylulose kinase A. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | 0.523 |
PV06_00604 | PV06_01034 | A0A0D2CDP4 | A0A0D2DZD0 | D-xylulose kinase A. | Ribose 5-phosphate isomerase. | 0.876 |
PV06_00604 | PV06_03490 | A0A0D2CDP4 | A0A0D2AZ21 | D-xylulose kinase A. | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.819 |
PV06_00604 | PV06_05068 | A0A0D2CDP4 | A0A0D2DNJ3 | D-xylulose kinase A. | Transaldolase. | 0.557 |
PV06_00604 | PV06_05120 | A0A0D2CDP4 | A0A0D2DNL5 | D-xylulose kinase A. | Ribose 5-phosphate isomerase A. | 0.876 |
PV06_00604 | PV06_05787 | A0A0D2CDP4 | A0A0D2DGT2 | D-xylulose kinase A. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.826 |
PV06_00604 | PV06_06883 | A0A0D2CDP4 | A0A0D2AMW8 | D-xylulose kinase A. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.898 |
PV06_00604 | PV06_09297 | A0A0D2CDP4 | A0A0D2D533 | D-xylulose kinase A. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.557 |
PV06_00604 | PV06_09744 | A0A0D2CDP4 | A0A0D2DPH5 | D-xylulose kinase A. | Gluconokinase; Belongs to the gluconokinase GntK/GntV family. | 0.847 |
PV06_00604 | PV06_10520 | A0A0D2CDP4 | A0A0D2AAW2 | D-xylulose kinase A. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.557 |
PV06_01009 | PV06_00604 | A0A0D2EKJ7 | A0A0D2CDP4 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | D-xylulose kinase A. | 0.523 |
PV06_01009 | PV06_01034 | A0A0D2EKJ7 | A0A0D2DZD0 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | Ribose 5-phosphate isomerase. | 0.529 |
PV06_01009 | PV06_03490 | A0A0D2EKJ7 | A0A0D2AZ21 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.995 |
PV06_01009 | PV06_05068 | A0A0D2EKJ7 | A0A0D2DNJ3 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | Transaldolase. | 0.912 |
PV06_01009 | PV06_05120 | A0A0D2EKJ7 | A0A0D2DNL5 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | Ribose 5-phosphate isomerase A. | 0.574 |
PV06_01009 | PV06_05787 | A0A0D2EKJ7 | A0A0D2DGT2 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.976 |
PV06_01009 | PV06_06883 | A0A0D2EKJ7 | A0A0D2AMW8 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.820 |
PV06_01009 | PV06_09297 | A0A0D2EKJ7 | A0A0D2D533 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.912 |
PV06_01009 | PV06_09744 | A0A0D2EKJ7 | A0A0D2DPH5 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | Gluconokinase; Belongs to the gluconokinase GntK/GntV family. | 0.891 |
PV06_01009 | PV06_10520 | A0A0D2EKJ7 | A0A0D2AAW2 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.912 |
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