PV06_09628 protein (Exophiala oligosperma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PV06_09628

Uncharacterized protein. (351 aa)

Predicted Functional Partners:

PV06_01834

0.860

PV06_07872

0.850

PV06_08129

0.818

PV06_05238

0.797

PV06_02112

0.794

PV06_01943

0.682

PV06_03579

0.657

PV06_07155

0.657

PV06_03483

0.657

PV06_07055

0.641

Your Current Organism:

Exophiala oligosperma

NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV06_01834	PV06_01943	A0A0D2C8K7	A0A0D2C8U6	Cytochrome c oxidase subunit 6, mitochondrial.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.998
PV06_01834	PV06_02112	A0A0D2C8K7	A0A0D2DV48	Cytochrome c oxidase subunit 6, mitochondrial.	Uncharacterized protein.	0.999
PV06_01834	PV06_05238	A0A0D2C8K7	A0A0D2AWM7	Cytochrome c oxidase subunit 6, mitochondrial.	Uncharacterized protein.	0.999
PV06_01834	PV06_07055	A0A0D2C8K7	A0A0D2DGK8	Cytochrome c oxidase subunit 6, mitochondrial.	Uncharacterized protein.	0.997
PV06_01834	PV06_07872	A0A0D2C8K7	A0A0D2DE09	Cytochrome c oxidase subunit 6, mitochondrial.	Uncharacterized protein.	0.999
PV06_01834	PV06_08129	A0A0D2C8K7	A0A0D2DAV5	Cytochrome c oxidase subunit 6, mitochondrial.	Cytochrome c oxidase subunit 6A, mitochondrial.	0.999
PV06_01834	PV06_09628	A0A0D2C8K7	A0A0D2BML7	Cytochrome c oxidase subunit 6, mitochondrial.	Uncharacterized protein.	0.860
PV06_01943	PV06_01834	A0A0D2C8U6	A0A0D2C8K7	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Cytochrome c oxidase subunit 6, mitochondrial.	0.998
PV06_01943	PV06_02112	A0A0D2C8U6	A0A0D2DV48	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Uncharacterized protein.	0.998
PV06_01943	PV06_05238	A0A0D2C8U6	A0A0D2AWM7	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Uncharacterized protein.	0.998
PV06_01943	PV06_07055	A0A0D2C8U6	A0A0D2DGK8	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Uncharacterized protein.	0.999
PV06_01943	PV06_07872	A0A0D2C8U6	A0A0D2DE09	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Uncharacterized protein.	0.999
PV06_01943	PV06_08129	A0A0D2C8U6	A0A0D2DAV5	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Cytochrome c oxidase subunit 6A, mitochondrial.	0.998
PV06_01943	PV06_09628	A0A0D2C8U6	A0A0D2BML7	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Uncharacterized protein.	0.682
PV06_02112	PV06_01834	A0A0D2DV48	A0A0D2C8K7	Uncharacterized protein.	Cytochrome c oxidase subunit 6, mitochondrial.	0.999
PV06_02112	PV06_01943	A0A0D2DV48	A0A0D2C8U6	Uncharacterized protein.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.998
PV06_02112	PV06_05238	A0A0D2DV48	A0A0D2AWM7	Uncharacterized protein.	Uncharacterized protein.	0.999
PV06_02112	PV06_07055	A0A0D2DV48	A0A0D2DGK8	Uncharacterized protein.	Uncharacterized protein.	0.998
PV06_02112	PV06_07872	A0A0D2DV48	A0A0D2DE09	Uncharacterized protein.	Uncharacterized protein.	0.999
PV06_02112	PV06_08129	A0A0D2DV48	A0A0D2DAV5	Uncharacterized protein.	Cytochrome c oxidase subunit 6A, mitochondrial.	0.998