STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_04010Uncharacterized protein. (215 aa)    
Predicted Functional Partners:
PV06_11077
Tryptophan synthase.
    
  0.726
PV06_03519
Tryptophan synthase.
    
  0.726
PV06_07137
Uncharacterized protein.
    
 0.697
PV06_02487
Aminotran_5 domain-containing protein.
   
 
 0.585
PV06_06723
Aspartate aminotransferase.
   
 0.578
PV06_03623
Aspartate aminotransferase.
   
  0.567
PV06_02461
MR_MLE domain-containing protein.
   
 0.566
PV06_01949
DAO domain-containing protein.
   
 
  0.550
PV06_02795
Malate synthase; Belongs to the malate synthase family.
   
 
 0.539
PV06_05311
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.538
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.